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AAV Knowledge Base/AAV advantages, limitations and immune factors
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AAV advantages, limitations and immune factors

AAV, AAV Knowledge Base

Updated Oct 19, 2026

Common advantages

  • Multiple levels of targeting can be achieved through natural or engineered capsids and transcriptional regulation; longer-term expression can be achieved in many terminally differentiated cells.
  • Recombinant vectors usually exist in extrachromosomal form and are suitable for in vivo delivery of secreted proteins, enzymes, reporter genes, regulatory elements and partial editing systems.
  • Existing clinical experience in the eye, liver, muscle and nervous system provides a mature analysis and risk framework for study design.

Limitations that must be proactively prompted

  • Packaging capacity is limited; scAAV capacity is smaller, and dual AAV will introduce co-transduction and recombination efficiency issues.
  • Neutralizing antibodies formed from previous exposure may reduce transduction and limit repeated dosing; both capsids and transgenes can trigger innate or adaptive immunity.
  • High systemic doses are associated with hepatotoxicity, complement-related events, and thrombotic microangiopathy; DRG pathology is seen in NHP with CSF or systemic administration.
  • Duration of expression depends on cell turnover, immune response, promoter silencing and disease context and should not be uniformly committed.
  • Mouse results cannot be directly extrapolated to NHPs or humans; receptor differences can create significant species barriers for engineered capsids.

References for this chapter

[7-1] Li C, Samulski RJ. Engineering adeno-associated virus vectors for gene therapy. Nat Rev Genet. 2020;21:255-272. DOI:10.1038/s41576-019-0205-4. PMID:32042148. [H]

[7-2] Costa Verdera H, Kuranda K, Mingozzi F. AAV vector immunogenicity in humans. Mol Ther. 2020;28:723-746. DOI:10.1016/j.ymthe.2019.12.010. PMID:31972133. [H]

[7-3] Muhuri M, et al. Overcoming innate immune barriers that impede AAV gene therapy vectors. J Clin Invest. 2021;131:143780. DOI:10.1172/JCI143780. PMID:33393506. [H]

[7-4] Hordeaux J, et al. AAV-induced dorsal root ganglion pathology. Hum Gene Ther. 2020;31:808-818. DOI:10.1089/hum.2020.167. PMID:32845779. [H]

[7-5] Lek A, et al. Death after high-dose rAAV9 gene therapy in Duchenne muscular dystrophy. N Engl J Med. 2023;389:1203-1210. DOI:10.1056/NEJMoa2307798. PMID:37754285. [N]